Is Omicron variant XBB.1.5’s superior binding causing higher transmissibility?
- January 8, 2023
- Posted by: OptimizeIAS Team
- Category: DPN Topics
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Is Omicron variant XBB.1.5’s superior binding causing higher transmissibility?
Subject :Science and Technology
Context:
- The XBB.1.5 Omicron recombinant variant that was first detected in the U.S. (New York and Connecticut) in late October 2022 has now spread to at least 29 countries.
XXB.1.5 variant:
- The XBB.1.5 variant is a descendant of XBB.1, which, in turn, descends from XBB.
- The XBB variant evolved through the recombination of two descendants of the earlier Omicron BA.2 variant.
- The XBB.1.5 variant was first found in India on December 30 last year, and as per INSACOG five XBB.1.5 variants have been detected so far — three cases in Gujarat and one each in Karnataka and Rajasthan.
- If XBB and XBB.1 already had high transmissibility and higher immune escape, the XBB.1.5 variant is even more transmissible while retaining significant immune escape ability.
- Both XBB.1 and XBB.1.5 “significantly” evaded convalescent plasma samples from BA.1, BA.5, and BF.7 breakthrough infections.
- However, XBB.1.5 displayed a slightly weaker immune evasion capability compared with XBB.1.
Transmissibility:
- XBB.1.5 is the most transmissible variant that has been detected yet.
- The reason for the high transmissibility of XBB.1.5 is the mutations within this recombinant sub-variant of Omicron.
- The underlying mechanism for such high transmissibility remains unclear.
- The additional mutation found on XBB.1.5 renders the virus with substantially higher binding affinity with the receptor compared with BQ.1.1 and XBB/XBB.1.
- And compared with XBB.1, the XBB.1.5 variant has comparable antibody evasion but displays distinct transmissibility suggesting that enhanced receptor-binding affinity would indeed lead to higher growth advantages.
- With a stronger immune escape ability than BQ.1.1 but limited by weaker binding affinity, XBB and XBB.1 were recorded only in a few countries. In contrast, with enhanced receptor-binding affinity but comparable antibody evasion, the prevalence of XBB.1.5 demonstrates that receptor-binding affinity will affect transmissibility.
Rare mutation of XXB.1.5:
- The additional mutation seen on XBB.1.5 is the S486P on the spike protein.
- The mutations at 486 reduce ACE2 [binding] affinity.
- The XBB.1.5 variant fixed the reduced binding affinity seen in XBB and XBB.1 by undergoing changes in two nucleotides to become S486P.
- XBB.1.5’s hACE2 binding affinity is almost comparable to that of BA.2.75, which may enable XBB.1.5 to gain more mutations, similar to what BA.2.75 had.